1. Installing JOREK on Eurofusion gateway.

Part of the instructions are copied from JOREK wiki pages, eventually instructions found here should overlap with those from JOREK wiki.

1.1. How to obtain JOREK source code - ITER git platform

• Request an account for the ITER platform via email.
• Request access to JOREK code
• Create an ssh keypair (help)

  • Run the command

    ssh-keygen -t rsa -C "<key identifier>"

    Example:

    ssh-keygen -t rsa -C "git.iter.org"

  • You will be prompted for a location to save your key. Be careful not to overwrite any existing keys that you still need!

  • You can add a password for an additional layer of security (encrypting your private key file) or proceed without a password. Push Enter when prompted for a password if you don't want to add a password.

  • Upload your public ssh key: https://git.iter.org/plugins/servlet/ssh/account/keys

    • The public key is stored in the .pub file.

    • The .pub file is a regular text file. You will need to copy its contents into the web form that you get after clicking “Add key”.

  • If you are using other keys, configure a .ssh/config file by adding:

    Host git.iter.org
     HostName git.iter.org
     IdentityFile ~/.ssh/id_rsa_iter

    if you named your file id_rsa_iter,

• Get the code from ITER platform
  • Your home directory is located on AFS  (/afs/eufus.eu/user/g/<username>) which is protected by ACL and by default is not accessible by batch. If you intend to submit your jobs to batch system it is better to use GPFS file system. Save your repository for example in /pfs/work/<username>/jorek folder.