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Introduction
This tutorial assumes that the installation will be performed in the user's $HOME directory, preferably in a public
subdirectory. The convention in this manual assumes the following directory structure:
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$HOME ├── public │ ├── modules │ ├── swimas │ ├── switm │ └── temp |
where:
modules
- is the location of themodulefiles
needed to install theIMAS
environment and its dependenciesswimas
- is the location where the IMAS itself will be installedswitm
- is the location where all needed dependencies will be installedtemp
- is the directory used for temporary files like source codes and can be removed after successful installation
Dependencies
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Remember to check with |
First, the necessary dependencies for the installation environment must be provided in specific order to be able to install all of them and IMAS itself. The following is a list with the order in which each dependency was installed:
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GCC v8.3.0
The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Ada, and Go, as well as libraries for these languages.There should be a system installation with the required version on the Marconi cluster. Just use the module to load it as below:
Code Block language bash module load gnu/8.3.0
Perl v5
The v5.16.3 version should be immediately available as part of the system.GNU Autoconf v2.69
The v2.69 version should be immediately available as part of the system.
GNU Automake v1.15
To install automake version 1.15 follow these steps:
Lp. Normal way Using Spack 1. Code Block language bash cd ~/public/temp
Code Block language bash spack install automake@1.15 %gcc@8.3.0
2. Code Block language bash wget https://ftp.gnu.org/gnu/automake/automake-1.15.tar.gz
3. Code Block language bash tar -xf automake-1.15.tar.gz
4. Code Block language bash cd automake-1.15
5. In this tutorial directory path is "~/public/switm/automake/1.15"
Code Block language bash # ./configure --prefix=<directory_path> ./configure --prefix=~/public/switm/automake/1.15
6. Code Block language bash make
7. Code Block language bash make install
Cmake v.3.20.6
Lp. Normal way Using Spack 1. Code Block language bash cd ~/public/temp
Code Block language bash spack install cmake@3.20.6 %gcc@8.3.0
2. Code Block language bash wget https://github.com/Kitware/CMake/releases/download/v3.20.6/cmake-3.20.6.tar.gz
3. Code Block language bash tar -xf cmake-3.20.6.tar.gz
4. Code Block language bash cd cmake-3.20.6.tar.gz
5. In this tutorial directory path is "~/public/switm/cmake/3.20.6"
Code Block language bash # ./configure --prefix=<directory_path> ./configure --prefix=~/public/switm/cmake/3.20.6
6. Code Block language bash make
7. Code Block language bash make install
Python v3.7.10
Lp. Normal way Using Spack 1. Code Block language bash cd ~/public/temp
Code Block language bash spack install cmake@3.20.6 %gcc@8.3.0
2. Code Block language bash wget https://github.com/Kitware/CMake/releases/download/v3.20.6/cmake-3.20.6.tar.gz
3. Code Block language bash tar -xf cmake-3.20.6.tar.gz
4. Code Block language bash cd cmake-3.20.6.tar.gz
5. In this tutorial directory path is "~/public/switm/cmake/3.20.6"
Code Block language bash # ./configure --prefix=<directory_path> ./configure --prefix=~/public/switm/cmake/3.20.6
6. Code Block language bash make
7. Code Block language bash make install
Cython 0.29.23
Java Development Kit v1.8.0_111
Intel Parallel Studio XE 2020
Git v2.17.0
Saxon v9
Blitz++ v1.0.2
MdsPlus v7.96.15