Introduction
This tutorial assumes that the installation will be performed in the user's $HOME directory, preferably in a public subdirectory. The convention in this manual assumes the following directory structure:
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| language | bash |
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| title | Directory Structure |
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$HOME
├── public
│ ├── modules
│ ├── swimas
│ ├── switm
│ └── temp |
where:
modules - is the location of the modulefiles needed to install the IMAS environment and its dependenciesswimas - is the location where the IMAS itself will be installedswitm - is the location where all needed dependencies will be installedtemp - is the directory used for temporary files like source codes and can be removed after successful installation
Dependencies
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Remember to check with module avail <dependency-name> if a given package in a specific version is available in system installations, if so use module load <dependency-name>/<version> to use this installation. If not, follow the steps in the manual. |
First, the necessary dependencies for the installation environment must be provided in specific order to be able to install all of them and IMAS itself. The following is a list with the order in which each dependency was installed:
GCC v8.3.0
The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Ada, and Go, as well as libraries for these languages.There should be a system installation with the required version on the Marconi cluster. Just use the module to load it as below:
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module load gnu/8.3.0 |
Perl v5
The v5.16.3 version should be immediately available as part of the system.
GNU Autoconf v2.69
The v2.69 version should be immediately available as part of the system.
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wget https://ftp.gnu.org/gnu/automake/automake-1.15.tar.gz |
GNU Automake v1.15
To install automake version 1.15 follow these steps:
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cd ~/public/temp |
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wget https://ftp.gnu.org/gnu/automake/automake-1.15.tar.gz |
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tar -xf automake-1.15.tar.gz |
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cd automake-1.15 |
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# ./configure --prefix=<directory_path>, for this tutorial directory_path is "~/public/switm/automake/1.15"
./configure --prefix=~/public/switm/automake/1.15 |
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make
make install |
Cmake v.3.20.6
Python v3.7.10
Cython 0.29.23
Java Development Kit v1.8.0_111
Intel Parallel Studio XE 2020
Git v2.17.0
Saxon v9
Blitz++ v1.0.2
MdsPlus v7.96.15
