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| Code Block |
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> mkdir -p ~/tmp/experiments/my_first_execution > cd ~/tmp/experiments/my_first_execution # This workflow simulates ETS workflow. # It uses actor that is centrally installed. > cp ~g2michal/public/nocpo_workflow.xml > setenv KEPLER /gw/switm/kepler/trunk/R6.0.7/kepler > $KEPLER/kepler.sh -cwd # Open file ~/tmp/experiments/my_first_execution/nocpo_workflow.xml and run the workflow |
Using centrally installed Kepler with sbk
sbk.sh was adapted to support centrally installed releases of Kepler. In order to use it one must do following:
| Code Block |
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> module load itmenv
> setenv KEPLER /gw/switm/kepler/trunk/R6.0.7/kepler
> module switch scripts/R4
# /gss_efgw_work/work/g2michal/cpt/issues/batch_and_central_kepler/Test.xml
# contains sample workflow that we can use for testing
# $ITMSCRIPTDIR/batch_submission/wrapper-central.sh
# contains modified wrapper script that supports centrally installed Kepler
# it should be backward compatible with regular Kepler
> sbk.sh -name=test_batch_central \
-file=/gss_efgw_work/work/g2michal/cpt/issues/batch_and_central_kepler/Test.xml \
-marco:mem=10 \
-marco:select=1 \
-marco:cpus=1 \
-marco:walltime=00:10:00 \
-marco:block=false \
-marco:queue=gw \
-wrapper=$ITMSCRIPTDIR/batch_submission/wrapper-central.sh |
Kplots and other scripts
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