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• Transfer the results to the Gateway:

  Code Block
  language bash
  docker cp imas:/home/imas/public/imasdb/test/3/0/ids_120001.characteristics /tmp/ docker cp imas:/home/imas/public/imasdb/test/3/0/ids_120001.datafile /tmp/ docker cp imas:/home/imas/public/imasdb/test/3/0/ids_120001.tree /tmp/

   

  • Docker on your own computer:

    Code Block
    language bash
    docker cp imas:/home/imas/public/imasdb/test/3/0/ids_120001.characteristics /tmp/ docker cp imas:/home/imas/public/imasdb/test/3/0/ids_120001.datafile /tmp/ docker cp imas:/home/imas/public/imasdb/test/3/0/ids_120001.tree /tmp/ scp /tmp/ids_120001.* login.eufus.eu:public/imasdb/test/3/0/

  • uDocker on Gateway:

    Code Block
    language bash
    cp ~/.udocker/containers/imas/ROOT/home/imas/public/imasdb/test/3/0/ids_120001.* ~/public/imasdb/test/3/0/

...

Demonstration 2: Kepler workflow

• Create a container and start a shell in it:

  • Docker on your own computer:

  Start a new Docker container

  • Code Block
    language bash
    docker run --interactive --tty --name imas imas-installer:20180921112143

  • uDocker on Gateway:

    Code Block
    language bash
    ~/.local/bin/udocker create --name=imas imas-installer:20180921112143 ~/.local/bin/udocker run imas

• In the container shell, execute:

  Code Block
  language bash
  module load imas kepler module load keplerdir imasdb test export USER=imas kepler -runwf -nogui -user imas /home/imas/simple-workflow.xml

  On the host machine, execute

• Transfer the results to the Gateway:

  • Docker on your own computer:

    Code Block
    language bash
    docker cp imas:/home/imas/public/imasdb/test/3/0/ids_10001.characteristics /tmp/ docker cp imas:/home/imas/public/imasdb/test/3/0/ids_10001.datafile /tmp/ docker cp imas:/home/imas/public/imasdb/test/3/0/ids_10001.tree /tmp/ scp /tmp/

  Transfer the generated IDSes to the

  • ids_10001.* login.eufus.eu:public/imasdb/test/3/0/

  • uDocker on Gateway:

    Code Block
    language bash

  scp

  • cp

  /tmp

  • ~/.udocker/containers/imas/ROOT/home/imas/public/imasdb/test/3/0/ids_10001.* ~/public/imasdb/test/3/0/

• On the host machine, execute:

  Code Block
  language bash
  docker cp imas:/home/imas/public/imasdb/test/3/0/ids_10001.characteristics /tmp/ docker cp imas:/home/imas/public/imasdb/test/3/0/ids_10001.datafile /tmp/ docker cp imas:/home/imas/login.eufus.eu:public/imasdb/test/3/0/

...

• ids_10001.tree /tmp/

• Check correctness of the results, on Gateway:

  Code Block
  language bash
  idsdump 1 1 equilibrium