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Install SUMI on the Gateway
Test connection with Marconi
Install uDocker on Marconi
Test image on Marconi
- Configure sample job
Submit workflow
Retrieve data
Visualize Test output on GW
Install SUMI on the Gateway
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The configuration file servers.conf located at local directory $HOME/.sumi/ contains the configuration for the servers where SUMI will connect The sample configuration file located at $SUMI_DIR/conf/servers.conf has the following content.
[machine]
server = example.com
user = username
manager = slurm
protocol = ssh
upload_files =
upload_to =
download_files =
download_to =
To configure the login node of y our cluster just specify the login node address, your user name and the name of the resource manager where the accepted are sge, slurm and pbs.
SUMI allows to upload and download files automatically. For this we can assume a directory "mywf" in our remote Marconi directory and another one in our local Gateway account, as well as a mywfresults folder on Gateway. This will
[machine]
server = login.marconi.cineca.it
user = my_username
manager = slurm
protocol = ssh
upload_files = /afs/eufus.eu/g2itmdev/user/my_username/mywf/*
upload_to = /marconi/home/userexternal/agutierr/mywf/
download_files = /marconi/home/userexternal/agutierr/mywf/test*
download_to = /afs/eufus.eu/g2itmdev/user/g2agutie/mywfresults/
Test connection with Marconi
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